Package index • callback

All functions

FindClustersCallback(): Runs a typical Seurat workflow on a Seurat object (up to dimensionality reduction and clustering).

compute_knockoff_filter(): Returns the genes selected by the knockoff filter

estimate_zi_poisson(): Random data generation for the zero-infalted Poisson distribution with Poisson parameter lambda and zero proportion prop.zero.

get_seurat_obj_with_knockoffs(): Returns a Seurat object that contains additional (fake) RNA expression counts in the form of knockoffs.

rzipoisson(): Random data generation for the zero-infalted Poisson distribution with Poisson parameter lambda and zero proportion prop.zero.

seurat_workflow(): Runs a typical Seurat workflow on a Seurat object (up to dimensionality reduction and clustering).